Natural gene / phase 1
MITF (splash white)
The first of the two splash white loci, carrying SW1,
SW3 and SW5. Splash is caused by variants in two different
genes — this one and PAX3 — and
that is the whole reason the old single horsegenetics.splash gene had to
go. SW1 is the widespread splash allele and the one that
hides in plain sight: one copy is usually a star and a sock, and
occasionally a blue-eyed splash, on the same genotype.
Crossing two of them
Deafness
The splash pattern comes from melanocytes failing to reach the skin, and the same
cells line the inner ear — so a horse white enough at this locus is very often
deaf. A homozygote at this locus (no N copy) gets the
splash-deafness condition.
It costs the horse nothing. The mod has no hearing for a horse to
lose, and inventing a penalty to stand in for one would be worse than saying so: it
is INFORMATIONAL — named in the info panel and the paper dump,
and that is all. See the horse’s body.
The condition is shared with PAX3: one
disorder with two causes. A horse homozygous at both loci is told it is deaf once,
not twice — TraitBuilder de-duplicates on the condition id for
exactly this case.
Its gene carrot
- Gene key
- horsegenetics.mitf
- Priority
- 78
- Alleles
- SW3 SW1 SW5 N
- Combinations
- 10, of which 9 a horse can carry, landing on 5 outcomes
- Outcomes
- wild,
splash-minimal,splash,splash-bold,splash-extensive - Default allele
- N
- Wild frequency
- founders carrying one copy:
MitfGene.WILD_SW1_PERCENT,WILD_SW5_PERCENT,WILD_SW3_PERCENT. Heterozygotes only — a doubled splash is bred, not caught - Founder draws
- 1 × nextFloat()
- Deterministic
- no
- Epi draws
- nextLong() waterline seed, nextFloat() waterline height, then the shared face-marking draw (1 long + 8 floats)
- Painter
WhitePattern.splash, at a strength per outcome — and over a range forSW1/N
The alleles
| Allele | One copy | Two copies |
|---|---|---|
N | — | wild type |
SW1 | usually subtle — a snip, a sock, sometimes a blue eye; occasionally a full splash | viable, and reliably whiter — the best-established viable splash homozygote there is |
SW3 | usually a more obvious splash | cannot occur — unconfirmed, likely embryonic lethal |
SW5 | splash-type, variable | viability not established — allowed |
SW6, SW7 and SW8 are folded into SW5
All four are MITF variants the source describes in word-for-word
identical terms — “splash-type variable white pattern; rare; homozygous
viability not established”. Four separate alleles would be four
indistinguishable rows in a table whose whole point is that each row says
something. SW5 stands for the group; splitting them out is one line
each the day the science separates them.
The combination table
| Combination | Outcome | Look |
|---|---|---|
SW3/SW1, SW3/SW5 | splash-extensive | everything below the topline white; colour only along the spine and over the ears |
SW3/N, SW1/SW1, SW1/SW5, SW5/SW5 | splash-bold | white well past elbow and stifle, bald face, topline and quarters coloured |
SW5/N | splash | high leg white with a clean edge, belly white, broad blaze |
SW1/N | splash-minimal | usually a star or a snip and a clean-edged sock or two — but the same genotype sometimes draws the full splash above |
N/N | wild type | nothing |
SW3/SW3 | cannot occur | |
SW1 is the one allele here with a documented viable dose effect, so its
homozygote is a step up rather than more of the same; SW3 is the strong
one, so any second variant beside it tips the horse into the extensive outcome.
SW1 is the common one, and it is usually invisible
SW1 is a 10-base-pair insertion in MITF’s
melanocyte-specific promoter — a regulatory change, an alteration to the switch
rather than to the protein. Three things follow, and together they make it unlike
every other allele on this page.
- It is old. Several hundred years, predating most modern breed
formations, which is why it turns up across stock horses, ponies, warmbloods and
gaited breeds alike rather than tracing to one stallion the way
SW5–SW8do. - It is widespread. In a 2022 survey it was the splash allele found in by far the most horses and the most breeds; the others are rare and family-limited.
- It is the most variably expressed thing in the white loci. One copy can be a snip and one white foot, or ordinary-looking face white beside a single blue eye, or a full blue-eyed splash — on the same genotype, in the same family.
The paper that identified it says the third point outright: in a minimally expressed
horse, splashed white cannot be told from common white markings by eye. So
SW1 is the allele that hides in plain sight, and the one
worth testing for when a horse’s markings look unremarkable.
Which is why SW1/N is painted over a range
Every other outcome in the white loci passes WhitePattern.splash a single
strength. SW1/N passes a pair, and the horse’s own
epigenetic roll picks a point between them — the same roll that then decides how
high the waterline sits, so a horse that drew a strong splash draws it high too. It
costs no extra draws; only what they are used for changes.
Modelling the widespread splash allele at a fixed strength would make it the one thing
it is documented not to be: predictable. The outcome is named
splash-minimal after the usual case, and its description says so.
Because one copy is subtle, SW1 also carries the mod’s
population of ordinary-looking marked horses — the stars, the socks,
the blazes. Most founders have one copy for exactly that reason.
In life that is not where ordinary markings come from. They are
largely polygenic, and the same study that identified SW1 found no
splash allele at all in 112 horses deliberately selected for minimal white. The mod
has no polygenic markings system, so the one allele that genuinely does hide in
plain sight is standing in for one. The honest fix is a markings system of its own;
it is on the roadmap and it is a new system, not
a tuning change.
How it paints
The horse dipped in white from below. One level waterline in absolute body-space Y rises with strength, taking the legs and belly whole, with a blaze widening to a bald face above it. The line is hard — wobbled at two octaves so it reads torn rather than ruled, but never faded:
- a sharply bounded margin is the diagnostic difference from
KIT’s ragged sabino edge, and the thing a horse is actually looked at to tell them apart; - the red/black gradient has no grey between a coloured texel and a spent one, so a half-scaled black texel samples the warm diagonal and reads gold. A one-pixel fade paints a tan fringe along the entire waterline. (It did, in the first bake.)
private static final double S_MINIMAL_LOW = 0.10; // SW1/N is a RANGE...
private static final double S_MINIMAL_HIGH = 0.44; // ...not a value
private static final double S_SPLASH = 0.38;
private static final double S_BOLD = 0.62;
private static final double S_EXTENSIVE = 0.86;
Measured white coverage over the standard seed set (the same
averageWhite helper WhitePatternGenesTest uses):
SW1/N 12%, SW5/N 17%, SW1/SW1 38%,
SW3/N 39%, SW3/SW1 69%. One copy each of SW1
and SW2 comes out at 38%
— well past either alone, which is the claim the split exists to make and which
that test pins as a threshold rather than a number.
Splash’s most recognisable feature is now modelled. Any
expressing combination at this locus claims a blue iris, not only the bold ones:
blue is diagnostic of splash even when the white itself is modest, which is how a
carrier is spotted in the field. It goes through the shared
eye-colour channel, at
RANK_DEPIGMENTED — so it beats
tiger eye’s amber, because a depigmented
iris has no pigment left to recolour.
One or two blue eyes. A depigmenting claim frequently fails to reach the whole of both irises: 62% of blue-eyed horses get two whole blue eyes, 22% get exactly one (complete heterochromia, the other eye keeping whatever colour the horse's pigment genes gave it), and 16% get a wedge in one or both. It is one roll off this locus's own stored values, inherited with the allele copy — see the spread.
The face
Splash’s face marking comes from the shared face-marking vocabulary, with a
jag of 0.11 — the same crispness that makes the waterline
diagnostic, carried onto the face. But splash runs its face much hotter than its
body: the marking strength is the outcome’s strength plus
SPLASH_FACE_BOOST (0.34), because a splashed white horse is defined as much
by a bold blaze as by the white climbing its legs. So splash reads as a
blaze, and splash-bold / a two-locus horse as a
bald face. (Without the boost, single-copy splash landed on stars and
snips and horses came out bare-faced — the regression this fixes.)
splash-minimal is the exception and deliberately so: it runs the ladder
from a star at the bottom of its range to a blaze at the top, which is what
“you cannot tell it from ordinary markings” has to look like.
PAX3 draws from the same vocabulary with the
same boost, so a horse splash at both loci gets one bold marking per locus rather than
two competing conventions.
Why splash is two genes
A gene has two slots. If SW1 and SW2 were alleles of one
gene, they would compete for those slots — and a horse could not carry both. In
life a horse carries N/SW1 at MITF and
N/SW2 at PAX3, and comes out with markedly more face, leg and
belly white than either alone. One gene cannot express that genotype at all.
Two MITF variants can still meet — SW1/SW3 is a real
compound heterozygote — and that is what this locus’s own table is for.
common/genetics/genes/MitfGene.java,
common/coat/pattern/WhitePattern.java